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  1. Article

    Open Access

    Occurrence of green mold disease on Dictyophora rubrovolvata caused by Trichoderma koningiopsis

    **aoyulong Chen, **aohui Zhou, ** Zhao, **aoli Tang in Journal of Plant Pathology (2021)

  2. Article

    Open Access

    Post-translational regulation of autophagy is involved in intra-microbiome suppression of fungal pathogens

    Microbiome interactions are important determinants for ecosystem functioning, stability, and health. In previous studies, it was often observed that bacteria suppress potentially pathogenic fungal species that...

    **g Wang, Chaoyun Xu, Qiming Sun, **rong Xu, Yunrong Chai, Gabriele Berg in Microbiome (2021)

  3. No Access

    Article

    First report of Camellia oleifera leaf blight caused by Nigrospora chinensis

    Shaozhao Qin, **aoyulong Chen, **aohui Zhou, ** Zhao in Journal of Plant Pathology (2021)

  4. Article

    Open Access

    Antimicrobial-specific response from resistance gene carriers studied in a natural, highly diverse microbiome

    Antimicrobial resistance (AMR) is a major threat to public health. Microorganisms equipped with AMR genes are suggested to have partially emerged from natural habitats; however, this hypothesis remains inconcl...

    Wisnu Adi Wicaksono, Peter Kusstatscher, Sabine Erschen in Microbiome (2021)

  5. No Access

    Article

    Bacterial seed endophyte shapes disease resistance in rice

    Cereal crop production is severely affected by seed-borne bacterial diseases across the world. Locally occurring disease resistance in various crops remains elusive. Here, we have observed that rice plants of ...

    Haruna Matsumoto, **aoyan Fan, Yue Wang, Peter Kusstatscher, Jie Duan in Nature Plants (2021)

  6. Article

    Open Access

    Trichomes form genotype-specific microbial hotspots in the phyllosphere of tomato

    The plant phyllosphere is a well-studied habitat characterized by low nutrient availability and high community dynamics. In contrast, plant trichomes, known for their production of a large number of metabolite...

    Peter Kusstatscher, Wisnu Adi Wicaksono, Alessandro Bergna in Environmental Microbiome (2020)

  7. Article

    Open Access

    Correction to: Microbiome definition re-visited: old concepts and new challenges

    An amendment to this paper has been published and can be accessed via the original article.

    Gabriele Berg, Daria Rybakova, Doreen Fischer, Tomislav Cernava in Microbiome (2020)

  8. Article

    Open Access

    Microbiome definition re-visited: old concepts and new challenges

    The field of microbiome research has evolved rapidly over the past few decades and has become a topic of great scientific and public interest. As a result of this rapid growth in interest covering different fi...

    Gabriele Berg, Daria Rybakova, Doreen Fischer, Tomislav Cernava in Microbiome (2020)

  9. No Access

    Chapter

    Using Bacteria-Derived Volatile Organic Compounds (VOCs) for Industrial Processes

    Microbial volatiles harbour an extensive spectrum of chemical compounds. Bacteria-derived volatile organic compounds (VOCs) were studied for decades in order to uncover their role in microbial interactions and...

    Peter Kusstatscher, Tomislav Cernava in Bacterial Volatile Compounds as Mediators … (2020)

  10. No Access

    Chapter

    How Microbiome Approaches Can Assist Industrial Development of Biological Control Products

    The excessive application of synthetic pesticides and agrochemicals during the last decades has caused serious environmental as well as health problems. Therefore, new and safer methods are needed to replace e...

    Manuela Rändler-Kleine, Adrian Wolfgang, Kristin Dietel in Integrative Biological Control (2020)

  11. Article

    Open Access

    Microbiome-driven identification of microbial indicators for postharvest diseases of sugar beets

    Sugar loss due to storage rot has a substantial economic impact on the sugar industry. The gradual spread of saprophytic fungi such as Fusarium and Penicillium spp. during storage in beet clamps is an ongoing cha...

    Peter Kusstatscher, Christin Zachow, Karsten Harms, Johann Maier in Microbiome (2019)

  12. Article

    Open Access

    Seeds of native alpine plants host unique microbial communities embedded in cross-kingdom networks

    The plant microbiota is crucial for plant health and growth. Recently, vertical transmission of a beneficial core microbiota was identified for crop seeds, but for native plants, complementary mechanisms are a...

    Birgit Wassermann, Tomislav Cernava, Henry Müller, Christian Berg in Microbiome (2019)

  13. Article

    Open Access

    A novel, nature-based alternative for photobioreactor decontaminations

    Large-scale microalgae cultivations are increasingly used for the production of animal feed, nutritional supplements and various high-value bioproducts. Due to the process size and other limitations, contamina...

    Lisa Krug, Armin Erlacher, Gabriele Berg, Tomislav Cernava in Scientific Reports (2019)

  14. Article

    Open Access

    Enterobacteriaceae dominate the core microbiome and contribute to the resistome of arugula (Eruca sativa Mill.)

    Arugula is a traditional medicinal plant and popular leafy green today. It is mainly consumed raw in the Western cuisine and known to contain various bioactive secondary metabolites. However, arugula has been ...

    Tomislav Cernava, Armin Erlacher, Jung Soh, Christoph W. Sensen, Martin Grube in Microbiome (2019)

  15. No Access

    Chapter

    Understanding the Indigenous Seed Microbiota to Design Bacterial Seed Treatments

    Within millennia of domestication, crops and their seeds underwent traceably different adaptive trends, allowing rapid speciation and divergence that lead to phenotypic and genotypic distinction to their wild ...

    Birgit Wassermann, Eveline Adam, Tomislav Cernava, Gabriele Berg in Seed Endophytes (2019)

  16. Article

    Open Access

    First evaluation of alkylpyrazine application as a novel method to decrease microbial contaminations in processed meat products

    Every year about 20% of the globally produced meat gets lost due to microbial spoilage. Nevertheless, the demand for processed meat is constantly rising and producers are searching for novel strategies to redu...

    Matthias Schöck, Stefan Liebminger, Gabriele Berg, Tomislav Cernava in AMB Express (2018)

  17. Article

    Open Access

    Replacing conventional decontamination of hatching eggs with a natural defense strategy based on antimicrobial, volatile pyrazines

    The treatment of hatching eggs relies on classic yet environmentally harmful decontamination methods such as formaldehyde fumigation. We evaluated bacteria-derived volatiles as a replacement within a fundament...

    Peter Kusstatscher, Tomislav Cernava, Stefan Liebminger in Scientific Reports (2017)

  18. Article

    Open Access

    Deciphering functional diversification within the lichen microbiota by meta-omics

    Recent evidence of specific bacterial communities extended the traditional concept of fungal-algal lichen symbioses by a further organismal kingdom. Although functional roles were already assigned to dominant ...

    Tomislav Cernava, Armin Erlacher, Ines Aline Aschenbrenner, Lisa Krug in Microbiome (2017)

  19. Article

    Open Access

    High Life Expectancy of Bacteria on Lichens

    Self-sustaining lichen symbioses potentially can become very old, sometimes even thousands of years in nature. In the joint structures, algal partners are sheltered between fungal structures that are externall...

    Tomislav Cernava, Gabriele Berg, Martin Grube in Microbial Ecology (2016)

  20. No Access

    Article

    Endophytes-assisted biocontrol: novel insights in ecology and the mode of action of Paenibacillus

    Biological control is an environmentally sound and effective means of reducing pathogen-induced damage to agriculture using natural antagonists. Paenibacillus is a cosmopolitan and ubiquitously occurring bacteria...

    Daria Rybakova, Tomislav Cernava, Martina Köberl, Stefan Liebminger in Plant and Soil (2016)

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