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  1. Article

    Open Access

    Pharmacological inhibition of α-synuclein aggregation within liquid condensates

    Aggregated forms of α-synuclein constitute the major component of Lewy bodies, the proteinaceous aggregates characteristic of Parkinson’s disease. Emerging evidence suggests that α-synuclein aggregation may oc...

    Samuel T. Dada, Zenon Toprakcioglu, Mariana P. Cali in Nature Communications (2024)

  2. Article

    Open Access

    Discovery of potent inhibitors of α-synuclein aggregation using structure-based iterative learning

    Machine learning methods hold the promise to reduce the costs and the failure rates of conventional drug discovery pipelines. This issue is especially pressing for neurodegenerative diseases, where the develop...

    Robert I. Horne, Ewa A. Andrzejewska, Parvez Alam in Nature Chemical Biology (2024)

  3. Article

    Open Access

    Misfolded protein oligomers: mechanisms of formation, cytotoxic effects, and pharmacological approaches against protein misfolding diseases

    The conversion of native peptides and proteins into amyloid aggregates is a hallmark of over 50 human disorders, including Alzheimer’s and Parkinson’s diseases. Increasing evidence implicates misfolded protein...

    Dillon J. Rinauro, Fabrizio Chiti, Michele Vendruscolo in Molecular Neurodegeneration (2024)

  4. Article

    Open Access

    Maturation-dependent changes in the size, structure and seeding capacity of Aβ42 amyloid fibrils

    Many proteins self-assemble to form amyloid fibrils, which are highly organized structures stabilized by a characteristic cross-β network of hydrogen bonds. This process underlies a variety of human diseases a...

    Alyssa Miller, Sean Chia, Ewa Klimont, Tuomas P. J. Knowles in Communications Biology (2024)

  5. Article

    Open Access

    Sequence-based prediction of the intrinsic solubility of peptides containing non-natural amino acids

    Non-natural amino acids are increasingly used as building blocks in the development of peptide-based drugs as they expand the available chemical space to tailor function, half-life and other key properties. Ho...

    Marc Oeller, Ryan J. D. Kang, Hannah L. Bolt in Nature Communications (2023)

  6. No Access

    Article

    Amyloid formation as a protein phase transition

    The formation of amyloid fibrils is a general class of protein self-assembly behaviour, which is associated with both functional biology and the development of a number of disorders, such as Alzheimer and Park...

    Thomas C. T. Michaels, Daoyuan Qian, Anđela Šarić in Nature Reviews Physics (2023)

  7. Article

    Open Access

    Case report of a patient with unclassified tauopathy with molecular and neuropathological features of both progressive supranuclear palsy and corticobasal degeneration

    Progressive supranuclear palsy (PSP) and corticobasal degeneration (CBD) are distinct clinicopathological subtypes of frontotemporal lobar degeneration. They both have atypical parkinsonism, and they usually h...

    Shunsuke Koga, Michael A. Metrick II in Acta Neuropathologica Communications (2023)

  8. No Access

    Article

    Extracellular protein homeostasis in neurodegenerative diseases

    The protein homeostasis (proteostasis) system encompasses the cellular processes that regulate protein synthesis, folding, concentration, trafficking and degradation. In the case of intracellular proteostasis,...

    Mark R. Wilson, Sandeep Satapathy, Michele Vendruscolo in Nature Reviews Neurology (2023)

  9. Article

    Open Access

    Amyloidogenic proteins in the SARS-CoV and SARS-CoV-2 proteomes

    The phenomenon of protein aggregation is associated with a wide range of human diseases. Our knowledge of the aggregation behaviour of viral proteins, however, is still rather limited. Here, we investigated th...

    Taniya Bhardwaj, Kundlik Gadhave, Shivani K. Kapuganti in Nature Communications (2023)

  10. Article

    Open Access

    Protein condensation diseases: therapeutic opportunities

    Condensed states of proteins, including liquid-like membraneless organelles and solid-like aggregates, contribute in fundamental ways to the organisation and function of the cell. Perturbations of these states...

    Michele Vendruscolo, Monika Fuxreiter in Nature Communications (2022)

  11. Article

    Open Access

    Small soluble α-synuclein aggregates are the toxic species in Parkinson’s disease

    Soluble α-synuclein aggregates varying in size, structure, and morphology have been closely linked to neuronal death in Parkinson’s disease. However, the heterogeneity of different co-existing aggregate specie...

    Derya Emin, Yu P. Zhang, Evgeniia Lobanova, Alyssa Miller in Nature Communications (2022)

  12. Article

    Open Access

    Misfolded protein oligomers induce an increase of intracellular Ca2+ causing an escalation of reactive oxidative species

    Alzheimer's disease is characterized by the accumulation in the brain of the amyloid β (Aβ) peptide in the form of senile plaques. According to the amyloid hypothesis, the aggregation process of Aβ also genera...

    Giulia Fani, Chiara Ester La Torre in Cellular and Molecular Life Sciences (2022)

  13. No Access

    Protocol

    Assessment of Therapeutic Antibody Developability by Combinations of In Vitro and In Silico Methods

    Although antibodies have become the fastest-growing class of therapeutics on the market, it is still challenging to develop them for therapeutic applications, which often require these molecules to withstand s...

    Adriana-Michelle Wolf Pérez, Nikolai Lorenzen in Therapeutic Antibodies (2022)

  14. Article

    Open Access

    An open-source automated PEG precipitation assay to measure the relative solubility of proteins with low material requirement

    The solubility of proteins correlates with a variety of their properties, including function, production yield, pharmacokinetics, and formulation at high concentrations. High solubility is therefore a key requ...

    Marc Oeller, Pietro Sormanni, Michele Vendruscolo in Scientific Reports (2021)

  15. Article

    Open Access

    The Hsc70 disaggregation machinery removes monomer units directly from α-synuclein fibril ends

    Molecular chaperones contribute to the maintenance of cellular protein homoeostasis through assisting de novo protein folding and preventing amyloid formation. Chaperones of the Hsp70 family can further disagg...

    Matthias M. Schneider, Saurabh Gautam, Therese W. Herling in Nature Communications (2021)

  16. Article

    Open Access

    The Amyloid-β Pathway in Alzheimer’s Disease

    Breakthroughs in molecular medicine have positioned the amyloid-β (Aβ) pathway at the center of Alzheimer’s disease (AD) pathophysiology. While the detailed molecular mechanisms of the pathway and the spatial-...

    Harald Hampel, John Hardy, Kaj Blennow, Christopher Chen in Molecular Psychiatry (2021)

  17. Article

    Open Access

    A maximum caliber approach for continuum path ensembles

    The maximum caliber approach implements the maximum entropy principle for trajectories by maximizing a path entropy under external constraints. The maximum caliber approach can be applied to a diverse set of e...

    Peter G. Bolhuis, Z. Faidon Brotzakis in The European Physical Journal B (2021)

  18. No Access

    Article

    A mistranslation-prone transcriptome underlying polyglutamine expansion diseases

    We propose a mechanism underlying polyglutamine (polyQ) repeat expansion diseases, in which the translation of expanded CAG codon repeats leads to translation stress. The stress is generated by depletion of th...

    Florian Buhr, Prashanth S. Ciryam in Nature Reviews Molecular Cell Biology (2021)

  19. Article

    Open Access

    Publisher Correction: Two human metabolites rescue a C. elegans model of Alzheimer’s disease via a cytosolic unfolded protein response

    Priyanka Joshi, Michele Perni, Ryan Limbocker, Benedetta Mannini in Communications Biology (2021)

  20. Article

    Open Access

    Exogenous misfolded protein oligomers can cross the intestinal barrier and cause a disease phenotype in C. elegans

    Misfolded protein oligomers are increasingly recognized as highly cytotoxic agents in a wide range of human disorders associated with protein aggregation. In this study, we assessed the possible uptake and result...

    Michele Perni, Benedetta Mannini, Catherine K. Xu, Janet R. Kumita in Scientific Reports (2021)

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