A Liver Segmentation Algorithm with Interactive Error Correction for Abdominal CT Images: A Preliminary Study

  • Conference paper
  • First Online:
Computational Intelligence in Data Science (ICCIDS 2021)

Part of the book series: IFIP Advances in Information and Communication Technology ((IFIPAICT,volume 611))

Included in the following conference series:

  • 527 Accesses

Abstract

An automatic method for segmenting the liver from the portal venous phase of abdominal CT images using the K-Means clustering method is described in this paper. We have incorporated an interactive technique for correcting the errors in the liver segmentation results using power law transformation. The proposed method was validated on abdominal CT volumes of fifteen patients obtained from Kasturba Medical College, Manipal. The average values of the various standard evaluation metrics obtained are as follows: Dice coefficient = 0.9361, Jaccard index = 0.8805, volumetric overlap error = 0.1195, absolute volume difference = 4.048%, average symmetric surface distance = 1.7282 mm and maximum symmetric surface distance = 38.039 mm. The quantitative and qualitative results obtained in our preliminary work show that the K-Means clustering technique along with power law transformation is effective in producing good liver segmentation outputs. As future work, we will attempt to automate the power law transformation technique.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Subscribe and save

Springer+ Basic
EUR 32.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or Ebook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 79.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 99.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free ship** worldwide - see info
Hardcover Book
USD 99.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free ship** worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Similar content being viewed by others

References

  1. Campadelli, P., Casiraghi, E., Esposito, A.: Liver segmentation from computed tomography scans: a survey and a new algorithm. Artif. Intell. Med. 45(2–3), 185–196 (2009). https://doi.org/10.1016/j.artmed.2008.07.020

    Article  Google Scholar 

  2. Lim, S.-J., Jeong, Y.-Y., Ho, Y.-S.: Automatic liver segmentation for volume meas-urement in CT Images. J. Vis. Commun. Image Represent. 17(4), 860–875 (2006). https://doi.org/10.1016/j.jvcir.2005.07.001

    Article  Google Scholar 

  3. Moghbel, M., Mashohor, S., Mahmud, R., Saripan, M.I.B.: Review of liver segmentation and computer assisted detection/diagnosis methods in computed tomography. Artif. Intell. Rev. 50(4), 497–537 (2017). https://doi.org/10.1007/s10462-017-9550-x

    Article  Google Scholar 

  4. Gotra, A., et al.: Liver segmentation: indications, techniques and future directions. Insights Imaging 8(4), 377–392 (2017). https://doi.org/10.1007/s13244-017-0558-1

    Article  Google Scholar 

  5. Siri, S.K., Latte, M.V.: Universal liver extraction algorithm: an improved Chan–vese model. J. Intell. Syst. 29(1), 237–250 (2020)

    Article  Google Scholar 

  6. Xu, L., Zhu, Y., Zhang, Y., Yang, H.: Liver segmentation based on region growing and level set active contour model with new signed pressure force function. Optik (Stuttg.) 202(July), 2019 (2020). https://doi.org/10.1016/j.ijleo.2019.163705

    Article  Google Scholar 

  7. Satpute, N., Gómez-Luna, J., Olivares, J.: Accelerating Chan-Vese model with cross-modality guided contrast enhancement for liver segmentation. Comput. Biol. Med. 124, 103930 (2020). https://doi.org/10.1016/j.compbiomed.2020.103930

    Article  Google Scholar 

  8. Li, Y., et al.: Liver segmentation from abdominal CT volumes based on level set and sparse shape composition. Comput. Methods Programs Biomed. 195, 105533 (2020). https://doi.org/10.1016/j.cmpb.2020.105533

  9. Danilov, A., Yurova, A.: Automated segmentation of abdominal organs from contrast-enhanced computed tomography using analysis of texture features. Int. J. Numer. Method. Bbiomed. Eng. 36(4), 1–14 (2020). https://doi.org/10.1002/cnm.3309

    Article  MathSciNet  Google Scholar 

  10. Muthuswamy, J.: Extraction and classification of liver abnormality based on neutrosophic and SVM classifier. In: Pati, B., Panigrahi, C.R., Misra, S., Pujari, A.K., Bakshi, S. (eds.) Progress in Advanced Computing and Intelligent Engineering. AISC, vol. 713, pp. 269–279. Springer, Singapore (2019). https://doi.org/10.1007/978-981-13-1708-8_25

    Chapter  Google Scholar 

  11. Lu, X., **e, Q., Zha, Y., Wang, D.: Fully automatic liver segmentation combining multi-dimensional graph cut with shape information in 3D CT images. Sci. Rep. 8(1), 10700 (2018). https://doi.org/10.1038/s41598-018-28787-y

    Article  Google Scholar 

  12. Kumar, S.S., Moni, R.S., Rajeesh, J.: Automatic liver and lesion segmentation: a primary step in diagnosis of liver diseases. Signal, Image Video Process. 7(1), 163–172 (2013). https://doi.org/10.1007/s11760-011-0223-y

    Article  Google Scholar 

  13. “DICOM Documentation- Modality Specific Modules.” http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.8.15.3.10.html. Accessed 20 Jan 2021

  14. “DICOM Documentation – Look Up Tables and Presentation States.” http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.11.2.html#sect_C.11.2.1.2.1. Accessed 20 Jan 2021

  15. Jain, A.K.: Fundamentals of Digital Image Processing, Prentice Hall, Englewood. Cliffs (1989)

    Google Scholar 

  16. Gonzalez, R., Woods, R.: Digital Image Processing, 3rd edn. Prentice-Hall, Inc., Englewood. Cliffs (2006)

    Google Scholar 

  17. Yushkevich, P.A., Gao, Y., Gerig, G.: ITK-SNAP: an interactive tool for semi-automatic segmentation of multi-modality biomedical images. In: 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pp. 3342–3345 (2016)

    Google Scholar 

  18. Taha, A.A., Hanbury, A.: Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool. BMC Med. Imaging 15, 29 (2015). https://doi.org/10.1186/s12880-015-0068-x

    Article  Google Scholar 

  19. Yeghiazaryan, V., Voiculescu, I.: Family of boundary overlap metrics for the evaluation of medical image segmentation. J. Med. Imaging (Bellingham, Wash.), 5(1), 15006 (2018). https://doi.org/10.1117/1.JMI.5.1.015006

Download references

Acknowledgments

The work is supported by KStePS, DST, Government of Karnataka, India. The authors are grateful to Manipal Institute of Technology, MAHE, Manipal for providing the facilities to carry out the research and Kasturba Medical College, Manipal, for providing the patient data.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Surekha Kamath .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2021 IFIP International Federation for Information Processing

About this paper

Check for updates. Verify currency and authenticity via CrossMark

Cite this paper

Nayantara, P.V., Kamath, S., Manjunath, K.N., Rajagopal, K.V. (2021). A Liver Segmentation Algorithm with Interactive Error Correction for Abdominal CT Images: A Preliminary Study. In: Krishnamurthy, V., Jaganathan, S., Rajaram, K., Shunmuganathan, S. (eds) Computational Intelligence in Data Science. ICCIDS 2021. IFIP Advances in Information and Communication Technology, vol 611. Springer, Cham. https://doi.org/10.1007/978-3-030-92600-7_13

Download citation

  • DOI: https://doi.org/10.1007/978-3-030-92600-7_13

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-030-92599-4

  • Online ISBN: 978-3-030-92600-7

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics

Navigation