Abstract
An automatic method for segmenting the liver from the portal venous phase of abdominal CT images using the K-Means clustering method is described in this paper. We have incorporated an interactive technique for correcting the errors in the liver segmentation results using power law transformation. The proposed method was validated on abdominal CT volumes of fifteen patients obtained from Kasturba Medical College, Manipal. The average values of the various standard evaluation metrics obtained are as follows: Dice coefficient = 0.9361, Jaccard index = 0.8805, volumetric overlap error = 0.1195, absolute volume difference = 4.048%, average symmetric surface distance = 1.7282 mm and maximum symmetric surface distance = 38.039 mm. The quantitative and qualitative results obtained in our preliminary work show that the K-Means clustering technique along with power law transformation is effective in producing good liver segmentation outputs. As future work, we will attempt to automate the power law transformation technique.
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References
Campadelli, P., Casiraghi, E., Esposito, A.: Liver segmentation from computed tomography scans: a survey and a new algorithm. Artif. Intell. Med. 45(2–3), 185–196 (2009). https://doi.org/10.1016/j.artmed.2008.07.020
Lim, S.-J., Jeong, Y.-Y., Ho, Y.-S.: Automatic liver segmentation for volume meas-urement in CT Images. J. Vis. Commun. Image Represent. 17(4), 860–875 (2006). https://doi.org/10.1016/j.jvcir.2005.07.001
Moghbel, M., Mashohor, S., Mahmud, R., Saripan, M.I.B.: Review of liver segmentation and computer assisted detection/diagnosis methods in computed tomography. Artif. Intell. Rev. 50(4), 497–537 (2017). https://doi.org/10.1007/s10462-017-9550-x
Gotra, A., et al.: Liver segmentation: indications, techniques and future directions. Insights Imaging 8(4), 377–392 (2017). https://doi.org/10.1007/s13244-017-0558-1
Siri, S.K., Latte, M.V.: Universal liver extraction algorithm: an improved Chan–vese model. J. Intell. Syst. 29(1), 237–250 (2020)
Xu, L., Zhu, Y., Zhang, Y., Yang, H.: Liver segmentation based on region growing and level set active contour model with new signed pressure force function. Optik (Stuttg.) 202(July), 2019 (2020). https://doi.org/10.1016/j.ijleo.2019.163705
Satpute, N., Gómez-Luna, J., Olivares, J.: Accelerating Chan-Vese model with cross-modality guided contrast enhancement for liver segmentation. Comput. Biol. Med. 124, 103930 (2020). https://doi.org/10.1016/j.compbiomed.2020.103930
Li, Y., et al.: Liver segmentation from abdominal CT volumes based on level set and sparse shape composition. Comput. Methods Programs Biomed. 195, 105533 (2020). https://doi.org/10.1016/j.cmpb.2020.105533
Danilov, A., Yurova, A.: Automated segmentation of abdominal organs from contrast-enhanced computed tomography using analysis of texture features. Int. J. Numer. Method. Bbiomed. Eng. 36(4), 1–14 (2020). https://doi.org/10.1002/cnm.3309
Muthuswamy, J.: Extraction and classification of liver abnormality based on neutrosophic and SVM classifier. In: Pati, B., Panigrahi, C.R., Misra, S., Pujari, A.K., Bakshi, S. (eds.) Progress in Advanced Computing and Intelligent Engineering. AISC, vol. 713, pp. 269–279. Springer, Singapore (2019). https://doi.org/10.1007/978-981-13-1708-8_25
Lu, X., **e, Q., Zha, Y., Wang, D.: Fully automatic liver segmentation combining multi-dimensional graph cut with shape information in 3D CT images. Sci. Rep. 8(1), 10700 (2018). https://doi.org/10.1038/s41598-018-28787-y
Kumar, S.S., Moni, R.S., Rajeesh, J.: Automatic liver and lesion segmentation: a primary step in diagnosis of liver diseases. Signal, Image Video Process. 7(1), 163–172 (2013). https://doi.org/10.1007/s11760-011-0223-y
“DICOM Documentation- Modality Specific Modules.” http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.8.15.3.10.html. Accessed 20 Jan 2021
“DICOM Documentation – Look Up Tables and Presentation States.” http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.11.2.html#sect_C.11.2.1.2.1. Accessed 20 Jan 2021
Jain, A.K.: Fundamentals of Digital Image Processing, Prentice Hall, Englewood. Cliffs (1989)
Gonzalez, R., Woods, R.: Digital Image Processing, 3rd edn. Prentice-Hall, Inc., Englewood. Cliffs (2006)
Yushkevich, P.A., Gao, Y., Gerig, G.: ITK-SNAP: an interactive tool for semi-automatic segmentation of multi-modality biomedical images. In: 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pp. 3342–3345 (2016)
Taha, A.A., Hanbury, A.: Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool. BMC Med. Imaging 15, 29 (2015). https://doi.org/10.1186/s12880-015-0068-x
Yeghiazaryan, V., Voiculescu, I.: Family of boundary overlap metrics for the evaluation of medical image segmentation. J. Med. Imaging (Bellingham, Wash.), 5(1), 15006 (2018). https://doi.org/10.1117/1.JMI.5.1.015006
Acknowledgments
The work is supported by KStePS, DST, Government of Karnataka, India. The authors are grateful to Manipal Institute of Technology, MAHE, Manipal for providing the facilities to carry out the research and Kasturba Medical College, Manipal, for providing the patient data.
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Nayantara, P.V., Kamath, S., Manjunath, K.N., Rajagopal, K.V. (2021). A Liver Segmentation Algorithm with Interactive Error Correction for Abdominal CT Images: A Preliminary Study. In: Krishnamurthy, V., Jaganathan, S., Rajaram, K., Shunmuganathan, S. (eds) Computational Intelligence in Data Science. ICCIDS 2021. IFIP Advances in Information and Communication Technology, vol 611. Springer, Cham. https://doi.org/10.1007/978-3-030-92600-7_13
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