Introduction

Since December 2019, novel coronavirus pneumonia (NCP) emerged in Wuhan, Hubei, which was well known as the largest transportation hub in China. The pathogen has been proved to be a novel betacoronavirus that is currently named 2019 novel coronavirus (2019-nCoV)1. The disease has swept across China rapidly through human-to-human transmission2,3,4. Since February 27, 2020, more than 78,000 people were confirmed to be infected and more than 2700 were died in China5.

As the number of patients soaring, scholars have summarized the clinical characteristics of NCP6,7,8. Symptoms at onset of disease included fever, cough, headache, vomiting, diarrhea and so on. Normal or decreased leukocyte count was common. Radiologic abnormalities like ground-glass opacity and patchy shadowing on chest X-ray or computed tomography (CT) were marked characteristics. Acute respiratory distress syndrome, arrhythmia and shock could also occur in severe cases. Until now, to detect 2019-nCoV by the accurate real-time reverse transcription polymerase chain amplification (RT-PCR) assessment has been regarded as the golden diagnostic standard9.

Nevertheless, false negative results in initial RT-PCR examination existed in a number of casesFull size table

Model score without epidemiological history (model 3) = 0.6 (if having coexisting diseases) + 0.8 (if having fatigue) + 1.2 (if having dyspnea) + 2.4 (if feeling muscle soreness) − 0.3 * WBC count − 0.3 * Lymphocyte count + 1.6 * pulmonary imaging score. The AUROC was 0.859 (95% CI 0.833–0.884) (Fig. 2), with the optimal cutoff value of − 1, a sensitivity of 83.5% (95% CI 79.1–87.1%), a specificity of 76.0% (95% CI 72.1–79.4%), a diagnostic accuracy of 78.9% (95% CI 76.2–81.7%), and a Youden index of 0.595. Repeated fivefold Cross-Validation showed the average AUROC was 0.854, with the standard deviation of 0.027. The Hosmer–Lemeshow χ2 was 12.218 (P = 0.142), indicating no statistical difference from a perfect fit.