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In situ enumeration and localization of the probiotic Pediococcus sp. strain Ab1 in the gut of abalone Haliotis gigantea

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  • Aquaculture
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Abstract

In this study, we established an optimized fluorescence in situ hybridization (FISH) protocol for detecting and enumerating host-derived probiotic Pediococcus sp. strain Ab1 cells in the gut of abalone. Samples were fixed with 4 % paraformaldehyde and hybridized at 40 °C for 3 h using a TAMRA (5-carboxytetramethylrhodamine)-labeled probe (Rpt probe). Strain Ab1 could be clearly discriminated from other control bacteria (Enterococcus, Lactobacillus). Fluorescence signals of Rpt-positive bacteria were easily distinguished from any detectable background noise. Rpt-positive bacteria were detected in both probiotic-supplemented and control abalone; nevertheless, the number of Rpt-positive bacteria in probiotic-supplemented abalone was two orders of magnitude higher than in controls. Furthermore, the mean number of Rpt-positive bacteria (probiotic-supplemented abalone) in the gut-attached section was also two orders of magnitude higher than in the free-living section. Rpt-positive micro-colonies (MCs) were observed by thin-section FISH analysis only in probiotic-supplemented abalone, and these MCs were observed in contact with intestinal epithelial cells. These results indicate that the probiotic Pediococcus sp. strain Ab1 can colonize or adhere to the abalone digestive tract in numbers sufficient for therapeutic effects. The data obtained using our FISH method provide clear and direct evidence of the formation of probiotic colonies in the gut of supplemented abalone.

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References

  1. Irianto A, Austin B (2002) Probiotics in aquaculture. J Fish Dis 25:633–642

    Article  Google Scholar 

  2. Itoi S, Uchida J, Takanashi S, Narita T, Abe K, Naya S, Sugita H (2013) The clam Meretrix lamarckii (Bivalvia: Veneridae) is a rich repository of marine lactic acid bacterial strains. Annal Microbiol 64:1267–1274

    Article  Google Scholar 

  3. Vine NG, Leukes WD, Kaiser H (2006) Probiotics in marine larviculture. FEMS Microbiol Rev 30:404–427

    Article  CAS  PubMed  Google Scholar 

  4. Balcázar JL, de Blas I, Ruíz-Zarzuela I, Cunningham D, Vendrell D, Múzquiz JL (2006) The role of probiotics in aquaculture. Vet Microbiol 114:173–186

    Article  PubMed  Google Scholar 

  5. Kesarcodi-Watson A, Kaspar H, Lategan MJ, Gibson L (2008) Probiotics in aquaculture: the need, principles and mechanisms of action and screening processes. Aquaculture 274:1–14

    Article  Google Scholar 

  6. Gatesoupe F (2008) Updating the importance of lactic acid bacteria in fish farming: natural occurrence and probiotic treatments. J Mol Microbiol Biotechnol 14:107–114

    Article  CAS  PubMed  Google Scholar 

  7. Farzanfar A (2006) The use of probiotics in shrimp aquaculture. FEMS Immunol Med Microbiol 48:149–158

    Article  CAS  PubMed  Google Scholar 

  8. Prado S, Romalde JL, Barja JL (2010) Review of probiotics for use in bivalve hatcheries. Vet Microbiol 145:187–197

    Article  PubMed  Google Scholar 

  9. Kiyomoto S, Tagawa M, Nakamura Y, Horii T, Watanabe S, Tozawa T, Yatsuya K, Yoshimura T, Tamaki A (2013) Decrease of abalone resources with disappearance of macroalgal beds around the Ojika islands, Nagasaki, southwestern Japan. J Shellfish Res. 32:51–58

    Article  Google Scholar 

  10. Oakes FR, Ponte RD (1996) The abalone market: opportunities for cultured abalone. Aquaculture 140:187–197

    Article  Google Scholar 

  11. Macey BM, Coyne VE (2005) Improved growth rate and disease resistance in farmed Haliotis midae through probiotic treatment. Aquaculture 245:249–261

    Article  Google Scholar 

  12. Macey BM, Coyne VE (2006) Colonization of the gastrointestinal tract of the farmed South African abalone Haliotis midae by the probionts Vibrio midae SY9, Cryptococcus sp. SS1, and Debaryomyces hansenii AY1. Marine Biotech 8:246–259

    Article  CAS  Google Scholar 

  13. Iehata S, Inagaki T, Okunishi S, Nakano M, Tanaka R, Maeda H (2009) Colonization and probiotic effects of lactic acid bacteria in the gut of abalone Haliotis gigantea. Fish Sci 75:1285–1293

    Article  CAS  Google Scholar 

  14. Iehata S, Nakano M, Tanaka R, Maeda H (2014) Modulation of gut microbiota associated with abalone Haliotis gigantea by dietary administration of host-derived Pediococcus sp. Ab1. Fish Sci 80:323–332

    Article  CAS  Google Scholar 

  15. Iehata S, Inagaki T, Okunishi S, Nakano M, Tanaka R, Maeda H (2010) Improved gut environment of abalone Haliotis gigantea through Pediococcus sp. Ab1 treatment. Aquaculture 305:59–65

    Article  Google Scholar 

  16. McCartney AL (2002) Application of molecular biological methods for studying probiotics and the gut flora. Br J Nutr 88:29–37

    Article  Google Scholar 

  17. Manz W, Amann R, Ludwig W, Vancanneyt M, Schleifer KH (1996) Application if a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment. Microbiology 142:1097–1106

    Article  CAS  PubMed  Google Scholar 

  18. Pernthaler J, GIöckner FO, Schönhuber W, Amann R (2001) Fluorescence in situ Hybridization (FISH) with rRNA-targeted Oligonucleotide Probes. Meth Microbiol 30:207–226

    Article  CAS  Google Scholar 

  19. Tanaka R, Ootsubo M, Sawabe T, Ezura Y, Tajima K (2004) Biodiversity and in situ abundance of gut microflora of abalone (Haliotis discus hannai) determined by culture-independent techniques. Aquaculture 241:453–463

    Article  Google Scholar 

  20. Huddy RJ, Coyne VE (2014) Detection and localisation of the abalone probiotic Vibrio midae SY9 and its extracellular protease, VmproA, within the digestive tract of the south African abalone. Haliotis midae. PLoS One 9:e86623

    Article  PubMed  Google Scholar 

  21. Tamura K, Peterson D, Peterson N, Stecher D, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetic analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  22. Sujaya IN, Amachi S, Saito K, Yokota A, Asano K, Tomita F (2002) Specific enumeration of lactic acid bacteria in ragi tape by colony hybridization with specific oligonucleotide probes. World J Microbiol Biotechnol 18:263–270

    Article  CAS  Google Scholar 

  23. Ben Amor K, Vaughan EE, De Vos WM (2007) Advanced molecular tools for the identification of lactic acid bacteria. J Nutr 137:741S–747S

    CAS  PubMed  Google Scholar 

  24. Roller C, Wagner M, Amann R, Ludwig W, Schleifer KH (1994) In situ probing of Gram-positive bacteria with high DNA G + C content using 23S rRNA-targeted oligonucleotides. Microbiology 140:2849–2858

    Article  CAS  PubMed  Google Scholar 

  25. Amann RI, Binder BJ, Olson RJ, Chisholm SW, Devereux R, Stahl DA (1990) Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol 56:1919–1925

    CAS  PubMed  PubMed Central  Google Scholar 

  26. Blasco L, Ferrer S, Pardo I (2003) Development of specific fluorescent oligonucleotideprobes for in situ identification of wine lactic acid bacteria. FEMS Microbiol Lett 225:115–123

    Article  CAS  PubMed  Google Scholar 

  27. Ootsubo M, Shimizu T, Tanaka R, Sawabe T, Tajima K, Ezura Y (2003) Seven-hour fluorescence in situ hybridization technique for enumeration of Enterobacteriaceae in food and environmental water sample. J Appl Microbiol 95:1182–1190

    Article  CAS  PubMed  Google Scholar 

  28. Kepner JR, Pratt JR (1994) Use of fluorochromes for direct enumeration of total bacteria in environmental samples: past and present. Microbial Rev 58:603–615

    CAS  Google Scholar 

  29. Tanaka R, Sugimura I, Sawabe T, Yoshimizu M, Ezura Y (2003) Gut microflora of abalone Haliotis discus hannai in culture changes coincident with a change in diet. Fish Sci 69:951–958

    Article  CAS  Google Scholar 

  30. Nayak SK (2010) Role of gastrointestinal microbiota in fish. Aquaculture Res 41:1553–1573

    Article  Google Scholar 

  31. Wang B, Li J, Li Q, Zhang H, Li N (2009) Isolation of adhesive strains and evaluation of the colonization and immune response by Lactobacillus plantarum L2 in the rat gastrointestinal tract. Int J Food Microbiol 132:59–66

    Article  CAS  PubMed  Google Scholar 

  32. Laudanno OM, Cesolari JA, Godoy A, Sutich E, Sarangone S, Catalano J, Miguel PS (2008) Bioflora probiotic in immunomodulation and prophylaxis of intestinal bacterial translocation in rats. Dig Dis Sci 53:2667–2670

    Article  CAS  PubMed  Google Scholar 

  33. Moter A, Gobel UB (2000) Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms. J Microbiol Meth 41:85–112

    Article  CAS  Google Scholar 

  34. Schonhuber W, Zarda B, Eix S, Rippka R, Herdmann M, Ludwig W, Amann R (1999) In situ identification of Cyano-bacteria with horseradish peroxidase-labeled, rRNA-targeted oligonucleotide probes. Appl Environ Microbiol 65:1259–1267

    CAS  PubMed  PubMed Central  Google Scholar 

  35. Wagner M, Schmid M, Juretschko S, Trebesius KH, Bubert A, Goebel W, Schleifer KH (1998) In situ detection of a virulence factor mRNA and 16S rRNA in Listeria monocytogenes. FEMS Microbiol Lett 160:159–168

    Article  CAS  PubMed  Google Scholar 

  36. Frostegård Å, Courtois S, Ramisse V, Clerc S, Bernillon D, Le GF, Jeannin P, Neesme X, Simonet P (1999) Quantification of bias related to the extraction of DNA directly from soils. Appl Environ Microbiol 65:5409–5420

    PubMed  PubMed Central  Google Scholar 

  37. Ferguson RMW, Merrifield DL, Harper GM, Rawling MD, Mustafa S, Picchietti S, Balcázar JL, Davies SJ (2010) The effect of Pediococcus acidilactici on the gut microbiota and immune status of on-growing red tilapia (Oreochromis niloticus). J Appl Microbiol 109:851–862

    Article  CAS  PubMed  Google Scholar 

  38. Vine NG, Leukes WD, Kaiser H (2004) In vitro growth characteristics of five candidate aquaculture probiotics and two fish pathogens grown in fish intestinal mucus. FEMS Microbiol Lett 231:145–152

    Article  CAS  PubMed  Google Scholar 

  39. Vine NG, Leukes WD, Kaiser H, Daya S, Baxter J, Hecht T (2004) Competition for attachment of aquaculture candidate probiotic and pathogenic bacteria on fish intestinal mucus. J Fish Dis 27:319–326

    Article  CAS  PubMed  Google Scholar 

  40. Mombelli B, Gismondo MR (2000) The use of probiotics in medicinal practice. Int J Antimicrob Agents 16:531–536

    Article  CAS  PubMed  Google Scholar 

  41. Klewicki R, Klewicka E (2004) Antagonistic activity of lactic acid bacteria as probiotics against selected bacteria of the Enterobaceriacae family in the presence of polyols and their galactosyl derivatives. Biotechnol Lett 26:317–320

    Article  CAS  PubMed  Google Scholar 

  42. Valeur N, Engel P, Carbajal N, Connolly E, Ladefoged K (2004) Colonization and immunomodulation by Lactobacillus reuteri ATCC 55730 in the human gastrointestinal tract. Appl Environ Microbiol 70:1176–1181

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Acknowledgments

We thank Mr. Atsushi Hamabe of the Owase Aquaculture Center for kindly providing the abalone samples. This work was supported by the Strategic Young Researcher Overseas Visits Program for Accelerating Brain Circulation of the Japan Society for the Promotion of Science (JSPS).

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Correspondence to Reiji Tanaka.

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Tanaka, R., Mitsuya, H., Aoki, M. et al. In situ enumeration and localization of the probiotic Pediococcus sp. strain Ab1 in the gut of abalone Haliotis gigantea . Fish Sci 82, 481–489 (2016). https://doi.org/10.1007/s12562-016-0981-0

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  • DOI: https://doi.org/10.1007/s12562-016-0981-0

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