Summary
Ribosomal RNA synthesis in a purified system is stimulated by a crude protein fraction prepared from E. coli. The positive effector which is not associated with RNA polymerase, nor is the sigma factor, increases the initiation frequency on a rRNA operon. The additional rRNA synthesis is inhibited by ppGpp to the same extent as the basal one.
The evidence presented points to the existence of a positive control element for rRNA synthesis, which activity depends upon the physiological state of the cell.
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References
Block, R.: Synthesis of ribosomal RNA in a partially purified extract from Escherichia coli. In: Control of ribosome synthesis (N.O. Kjeldgaard and O.Malløe, eds.), pp. 226–238. Copenhagen: Munksgaard 1976
Burgess, R.R., Travers, A.A.: DNA-dependent RNA polymerase. In: Procedures in nucleic acid research, Vol 2 (G.L. Cantoni and D.R. Davies, eds.), pp. 851–863. New York: Harper and Row 1971
Cashel, M.: Preparation of guanosine tetraphosphate (ppGpp) and guanosine pentaphosphate (pppGpp) from Escherichia coli ribosomes. Anal. Biochem. 57, 100–107 (1974)
Cashel, M.: Regulation of ppGpp and pppGpp. Ann. Rev. Biochem. 44, 301–318 (1975)
Cashel, M., Gallant, J.: Two compounds implicated in the function of the R.C. gene of Escherichia coli. Nature 221:838–840 (1969)
Cox, R.F.: Transcription of high-molecular-weight RNA from henoviduct chromatin by bacterial and endogenous form-B RNA polymerase. Eur. J. Biochem. 39, 49–61 (1973)
Fiil, N.P., Von Meyenburg, K., Friesen, J.D.: Accumulation and turnover of guanosine tetraphosphate in Escherichia coli. J. Mol. Biol. 71, 769–783 (1972)
Gruber, M., Hamming, J., de Lange, F.S.F., Oostra, B.A., van Ooyen, A.J.J.: In: Gene expression (B.F.C. Clark, H. Klenow, J. Zeuthen, eds.), Vol. 43, pp. 145–152 Oxford and New York: Pergamon Press 1978
Hansen, M.T., Pato, M.L., Molin, S., Fiil, N.P., Von Meyenburg, K.: Simple downshift and resulting lack of correlation between ppGpp pool size and ribonucleic acid accumulation. J. Bacteriol. 122, 585–591 (1975)
Hamming, J., Gruber, M. and AB, G.: Interaction between RNA polymerase and a ribosomal RNA promotor of E. coli. Nucleic Acids Res., in press (1979)
Jones, G.: On the efficiency of commenly used ribonuclease inhibitors. Biochem. Biophys. Res. Commun. 69, 469–474 (1976)
Jørgensen, P., Fiil, N.P.: Ribisomal RNA synthesis in vitro. In: Control of ribosome synthesis (N.O. Kjeldgaard and O. Maaløe, eds.), pp. 370–382. Copenhagen: Munksgaard 1976
Lindahl, L., Jaskunas, S.R., Dennis, P.P., Nomura, M.: Cluster of genes in Escherichia coli for ribosoma proteins, ribosomal RNA and RNA polymerase subunits. Proc. Natl. Acad. Sci. U.S.A. 72, 2743–2747 (1975)
Lowe, P.A., Hager, D.A., Burgess, R.R.: Purification and properties of the subunit of Escherichia coli DNA-dependent RNA polymerase. Biochemistry 18, 1344–1352 (1979)
Maaløe, O., Kjeldgaard, N.O.: Control of macromolecular synthesis, pp. 70–86. New York-Amsterdam: Benjamin 1966
Miller, J.H.: Experiments in molecular genetics, pp. 319–327 (New York: Cold Spring Harbor Laboratory) 1972
Muto, A.: Control of ribosomal RNA synthesis in Escherichia coli III. Cytoplasmic factor for ribosomal RNA synthesis. Mol. Gen. Genet. 152, 161–165 (1977)
Oostra, B.A., Van Ooyen, A.J.J., Gruber, M.: In vitro transcription of three different ribosomal RNA cistrons of E. coli; heterogeneity of control regions. Mol. Gen. Genet. 152, 1–6 (1977)
Oostra, B.A., Zantinge, B., Van Goor, A.L., Van Ooyen, A.J.J., Gruber, M.: A rapid and sensitive determination of bacterial rRNA by means of hybridization-competition. Anal. Biochem. 74, 496–502 (1976)
Ooyen, A.J.J. van, De Boer, H.A., AB, G., Gruber, M.: Specific inhibition of ribosomal RNA synthesis in vitro by guanosine 3′ diphosphate, 5′ diphosphate. Nature 254, 530–531 (1975a)
Ooyen, A.J.J. van, de Boer, H.A., AB, G., Gruber, M.: Ribosomal and nonribosomal RNA synthesis in vitro. Biochim. Biophys. Acta 395, 128–135 (1975b)
Ooyen, A.J.J. van, Gruber, M., Jørgensen, P.: The mechanism of action of ppGpp on rRNA synthesis in vitro. Cell. 8, 123–128 (1976)
Pato, M.L., Von Meyenburg, K.: Residual RNA synthesis in Escherichia coli after inhibition of initiation of transcription by rifampicin. Cold Spring Harbor Symp. Quant. Biol. 35, 497–504 (1970)
Reiness, G., Yang, H.-L., Zubay, G., Cashel, M.: Effects of guanosine tetraphosphate on cell-free synthesis of Escherichia coli ribosomal RNA and other gene products. Proc. Natl. Acad. Sci. U.S.A. 72, 2881–2885 (1975)
Wehrli, W., Knüsel, F., Schmid, K., Staehelin, M.: Interactions of rifampicin with bacterial RNA polymerase. Proc. Natl. Acad. Sci. U.S.A. 61, 667–673 (1968)
Zillig, W., Zechel, K., Rabussay, D., Schachner, M., Sethi, V.S., Palm, P., Heil, A., Seifert, W.: On the rule of different subunits of DNA-dependent RNA polymerase from E. coli in the transcription process. Cold Spring Harbor Symp. Quant. Biol. 35, 47–58 (1970)
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Oostra, B.A., Geert, A. & Gruber, M. Specific stimulation of ribosomal RNA synthesis in E. coli by a protein factor. Molec. Gen. Genet. 177, 291–295 (1980). https://doi.org/10.1007/BF00267441
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DOI: https://doi.org/10.1007/BF00267441